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. c) The first two lines of the second block of commands, could have been written as the second line of the first block of commands. | . c) The first two lines of the second block of commands, could have been written as the second line of the first block of commands. This command sets RA to a rotation that rotates a 2D image by 25 degrees around the Z-axis. |
Name
Transform Class
Usage
Examples
- Here are some examples of creating a Transform3D object. Much more will be added later.
All angles are in degrees
Creating just rotations:
- RA=Transform3D(0,0,25); # Default is the ZXZ convention
- RA=Transform3D(EULER_SPIDER,0,0,25); # This is the typical ZYZ convention
- RA=Transform3D(m11,m12,m13,m21,m22,m23,m31,m32,m33) # create the transformation by entering
- components
Creating more complicated transformations using set :
- RA = Transform3D(); # this creates the 3D identity matrix
- RA.set_rotation(0,0,25); # creates a matrix that will rotate 2D images by 25 degrees
- RA.set_posttrans(Vec3f(1,0,0)); # the matrix will now also shift 1 pixel in the x-direction
- RA.set_scale(1); # Occaisionally one will wish to rescale.
Notes:
- a) We could have used EMAN, IMAGIC, SPIN, QUATERNION, SGIROT, MRC, XYZ, MATRIX instead of the SPIDER of EULER_SPIDER above.
- b) There is also a set_rotation via a dictionary object, which we will explain at length soon.
- c) The first two lines of the second block of commands, could have been written as the second line of the first block of commands. This command sets RA to a rotation that rotates a 2D image by 25 degrees around the Z-axis.
- d) There are corresponding "get" calls to extract the information from the transformation matrices. SPARX has some of its own, that are wrappers for these get calls. More later.
Description
Purpose: to apply rotation/shift/scaling operations for 2D or 3D images via a variety of methods.
Author
P. R. Baldwin
Maintainer
P. R. Baldwin
Keywords
- category 1
- FUNDAMENTALS
Files
libEM
See also
Maturity
Infancy